Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Gm13186-201ENSMUST00000118031 316 ntBASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.45□□□□□ -0.1
Krt88Q9CPR6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Gm20760-201ENSMUST00000179197 648 ntBASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt88Q9CPR6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Trmt13-210ENSMUST00000198454 880 ntBASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Gm18115-201ENSMUST00000221209 621 ntBASIC14.43□□□□□ -0.1
Krt88Q9CPR6 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt88Q9CPR6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Gm37856-201ENSMUST00000191634 999 ntBASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms