Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm14859-201ENSMUST00000117752 357 ntBASIC15.85■□□□□ 0.13
Trim33Q99PP7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.84■□□□□ 0.13
Trim33Q99PP7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim33Q99PP7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim33Q99PP7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trim33Q99PP7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Gm27742-201ENSMUST00000184667 60 ntBASIC15.83■□□□□ 0.12
Trim33Q99PP7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim33Q99PP7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Olfr129-201ENSMUST00000122318 993 ntBASIC15.82■□□□□ 0.12
Trim33Q99PP7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Gm7367-201ENSMUST00000057611 492 ntBASIC15.82■□□□□ 0.12
Trim33Q99PP7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim33Q99PP7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.81■□□□□ 0.12
Trim33Q99PP7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms