Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Gm18421-201ENSMUST00000204122 625 ntBASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Gm18115-201ENSMUST00000221209 621 ntBASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim8Q99PJ2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trim8Q99PJ2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Gm27463-201ENSMUST00000183569 57 ntBASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim8Q99PJ2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Gm15565-201ENSMUST00000118890 427 ntBASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms