Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Mir7085-201ENSMUST00000184353 66 ntBASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Gm27430-201ENSMUST00000184585 107 ntBASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Gm44333-201ENSMUST00000197168 107 ntBASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdh23Q99PF4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.16■□□□□ 0.18
Cdh23Q99PF4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh23Q99PF4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Gm15653-201ENSMUST00000119247 907 ntBASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Gm43630-201ENSMUST00000201550 776 ntBASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh23Q99PF4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh23Q99PF4 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.14■□□□□ 0.17
Cdh23Q99PF4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms