Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Mir449b-201ENSMUST00000104833 80 ntBASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Mir6990-201ENSMUST00000183724 91 ntBASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Gm27300-201ENSMUST00000184085 97 ntBASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Gm27335-201ENSMUST00000184758 97 ntBASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Gm17968-201ENSMUST00000194902 784 ntBASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col25a1Q99MQ5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Gm12490-201ENSMUST00000120255 560 ntBASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Gm27430-201ENSMUST00000184585 107 ntBASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Gm44333-201ENSMUST00000197168 107 ntBASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.48■□□□□ 0.23
Col25a1Q99MQ5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col25a1Q99MQ5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms