Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Gm3375-201ENSMUST00000203929 796 ntBASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd1Q99J36 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd1Q99J36 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Thumpd1Q99J36 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms