Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.38■□□□□ 0.53
Smc1bQ920F6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc1bQ920F6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Gm12260-201ENSMUST00000122447 411 ntBASIC18.37■□□□□ 0.53
Smc1bQ920F6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Gm24513-201ENSMUST00000174964 138 ntBASIC18.37■□□□□ 0.53
Smc1bQ920F6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.37■□□□□ 0.53
Smc1bQ920F6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.37■□□□□ 0.53
Smc1bQ920F6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.37■□□□□ 0.53
Smc1bQ920F6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Gm27397-201ENSMUST00000184997 107 ntBASIC18.36■□□□□ 0.53
Smc1bQ920F6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc1bQ920F6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.35■□□□□ 0.53
Smc1bQ920F6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms