Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Gm6754-201ENSMUST00000117124 913 ntBASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Gm13559-201ENSMUST00000120476 863 ntBASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Gm45760-201ENSMUST00000212190 1782 ntBASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb3Q91XZ7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Gm10231-201ENSMUST00000181584 441 ntBASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Gm43930-201ENSMUST00000203868 845 ntBASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Gm10175-202ENSMUST00000208752 441 ntBASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb3Q91XZ7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Gm12085-201ENSMUST00000119263 940 ntBASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Gm11539-201ENSMUST00000119837 557 ntBASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Gm13436-201ENSMUST00000120418 567 ntBASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb3Q91XZ7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms