Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Gm9013-201ENSMUST00000132939 882 ntBASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Gm44430-201ENSMUST00000203376 995 ntBASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Gm5587-201ENSMUST00000206270 674 ntBASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb4Q91XX6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgb4Q91XX6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgb4Q91XX6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgb4Q91XX6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms