Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhgc5Q91XW9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Gm23935-201ENSMUST00000102303 57 ntBASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Gm24270-201ENSMUST00000102326 57 ntBASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Gm24245-201ENSMUST00000157318 57 ntBASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc5Q91XW9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Gm6736-201ENSMUST00000166583 948 ntBASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc5Q91XW9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Pcdhgc5Q91XW9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Pcdhgc5Q91XW9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc5Q91XW9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgc5Q91XW9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms