Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.94■□□□□ 0.3
TraipQ8VIG6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TraipQ8VIG6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Gm15467-201ENSMUST00000120582 445 ntBASIC16.93■□□□□ 0.3
TraipQ8VIG6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Gm9727-201ENSMUST00000161387 555 ntBASIC16.93■□□□□ 0.3
TraipQ8VIG6 Gm37935-201ENSMUST00000192012 982 ntBASIC16.93■□□□□ 0.3
TraipQ8VIG6 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.93■□□□□ 0.3
TraipQ8VIG6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.93■□□□□ 0.3
TraipQ8VIG6 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.93■□□□□ 0.3
TraipQ8VIG6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TraipQ8VIG6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TraipQ8VIG6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.92■□□□□ 0.3
TraipQ8VIG6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Gm37153-201ENSMUST00000193637 231 ntBASIC16.92■□□□□ 0.3
TraipQ8VIG6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TraipQ8VIG6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.91■□□□□ 0.3
TraipQ8VIG6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.91■□□□□ 0.3
TraipQ8VIG6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TraipQ8VIG6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms