Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Gm13823-201ENSMUST00000119930 345 ntBASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lmcd1Q8VEE1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lmcd1Q8VEE1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Lmcd1Q8VEE1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Lmcd1Q8VEE1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lmcd1Q8VEE1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lmcd1Q8VEE1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.96■□□□□ 0.3
Lmcd1Q8VEE1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Gm10253-201ENSMUST00000194270 940 ntBASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Gm7774-201ENSMUST00000200064 533 ntBASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lmcd1Q8VEE1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm22065-201ENSMUST00000103753 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm22066-201ENSMUST00000103761 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm24932-201ENSMUST00000103763 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm24115-201ENSMUST00000103799 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm22190-201ENSMUST00000103827 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm22191-201ENSMUST00000103831 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm24721-201ENSMUST00000103849 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm28018-201ENSMUST00000103869 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm26399-201ENSMUST00000103937 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm25349-201ENSMUST00000177728 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm23616-201ENSMUST00000177797 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm25871-201ENSMUST00000177816 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm24752-201ENSMUST00000178240 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm24496-201ENSMUST00000178287 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm25649-201ENSMUST00000178476 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm25548-201ENSMUST00000178681 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm23147-201ENSMUST00000178841 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm26095-201ENSMUST00000179270 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm22171-201ENSMUST00000179283 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm23936-201ENSMUST00000179354 110 ntBASIC16.94■□□□□ 0.3
Lmcd1Q8VEE1 Gm22619-201ENSMUST00000179516 110 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms