Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 CT030684.3-201ENSMUST00000227308 2445 ntBASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Gm7290-201ENSMUST00000104990 617 ntBASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Gm12918-201ENSMUST00000120234 636 ntBASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Gm15710-201ENSMUST00000121821 636 ntBASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Gm5075-201ENSMUST00000196916 622 ntBASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc9Q8VC31 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc9Q8VC31 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc9Q8VC31 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc9Q8VC31 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Gm10418-201ENSMUST00000100943 576 ntBASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc9Q8VC31 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms