Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Gm7284-201ENSMUST00000131667 944 ntBASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Top1mtQ8R4U6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Top1mtQ8R4U6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Top1mtQ8R4U6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Top1mtQ8R4U6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Top1mtQ8R4U6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Top1mtQ8R4U6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Top1mtQ8R4U6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.08■□□□□ 0.65
Top1mtQ8R4U6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Top1mtQ8R4U6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Mir3081-201ENSMUST00000175305 84 ntBASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Gm7977-201ENSMUST00000193787 748 ntBASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Top1mtQ8R4U6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.07■□□□□ 0.64
Top1mtQ8R4U6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Top1mtQ8R4U6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Top1mtQ8R4U6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Top1mtQ8R4U6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms