Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Mir6404-201ENSMUST00000183699 94 ntBASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna3Q8R4G9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Gm11452-201ENSMUST00000122376 690 ntBASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Gm7506-201ENSMUST00000207758 815 ntBASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chrna3Q8R4G9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Gm9172-201ENSMUST00000212092 954 ntBASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Chrna3Q8R4G9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms