Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Gm42723-201ENSMUST00000199966 1044 ntBASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 AC161426.1-201ENSMUST00000214137 286 ntBASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 AC125117.2-201ENSMUST00000228344 1140 ntBASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cacnb1Q8R3Z5 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Gm22885-201ENSMUST00000157410 107 ntBASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Gm22693-201ENSMUST00000175049 442 ntBASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacnb1Q8R3Z5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacnb1Q8R3Z5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacnb1Q8R3Z5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacnb1Q8R3Z5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacnb1Q8R3Z5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacnb1Q8R3Z5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacnb1Q8R3Z5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacnb1Q8R3Z5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms