Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.14■□□□□ 0.33
Nup58Q8R332 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.14■□□□□ 0.33
Nup58Q8R332 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup58Q8R332 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup58Q8R332 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Nup58Q8R332 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup58Q8R332 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup58Q8R332 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup58Q8R332 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup58Q8R332 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup58Q8R332 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Nup58Q8R332 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.12■□□□□ 0.33
Nup58Q8R332 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nup58Q8R332 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Gm6345-202ENSMUST00000180900 204 ntBASIC17.12■□□□□ 0.33
Nup58Q8R332 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Nup58Q8R332 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.12■□□□□ 0.33
Nup58Q8R332 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nup58Q8R332 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nup58Q8R332 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup58Q8R332 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.11■□□□□ 0.33
Nup58Q8R332 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.11■□□□□ 0.33
Nup58Q8R332 Gm25016-201ENSMUST00000158399 131 ntBASIC17.11■□□□□ 0.33
Nup58Q8R332 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Gm7370-201ENSMUST00000219471 767 ntBASIC17.11■□□□□ 0.33
Nup58Q8R332 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nup58Q8R332 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Gm10819-201ENSMUST00000099988 561 ntBASIC17.11■□□□□ 0.33
Nup58Q8R332 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Asic1-205ENSMUST00000228185 1818 ntBASIC17.11■□□□□ 0.33
Nup58Q8R332 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.11■□□□□ 0.33
Nup58Q8R332 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup58Q8R332 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup58Q8R332 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms