Protein–RNA interactions for Protein: Q8QZY9

Sf3b4, Splicing factor 3B subunit 4, mousemouse

Known RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4Q8QZY9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3b4Q8QZY9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3b4Q8QZY9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Mir770-201ENSMUST00000103252 94 ntBASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Gm11336-201ENSMUST00000118168 334 ntBASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b4Q8QZY9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Ank2-226ENSMUST00000189368 339 ntBASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3b4Q8QZY9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b4Q8QZY9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.89□□□□□ -0.03
Sf3b4Q8QZY9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b4Q8QZY9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms