Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a1Q8K4Z5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Gm27867-201ENSMUST00000184778 125 ntBASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a1Q8K4Z5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3a1Q8K4Z5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3a1Q8K4Z5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.52■□□□□ 0.71
Sf3a1Q8K4Z5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3a1Q8K4Z5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.51■□□□□ 0.71
Sf3a1Q8K4Z5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Dancr-204ENSMUST00000132389 2347 ntBASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a1Q8K4Z5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a1Q8K4Z5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms