Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.09■□□□□ 0.01
Clrn1Q8K445 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.09■□□□□ 0.01
Clrn1Q8K445 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Clrn1Q8K445 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn1Q8K445 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn1Q8K445 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn1Q8K445 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn1Q8K445 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Olfr129-201ENSMUST00000122318 993 ntBASIC15.08■□□□□ 0
Clrn1Q8K445 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.08■□□□□ 0
Clrn1Q8K445 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.08■□□□□ 0
Clrn1Q8K445 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Clrn1Q8K445 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn1Q8K445 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Clrn1Q8K445 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Clrn1Q8K445 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.07■□□□□ 0
Clrn1Q8K445 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.07■□□□□ 0
Clrn1Q8K445 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.07■□□□□ 0
Clrn1Q8K445 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Clrn1Q8K445 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clrn1Q8K445 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.06■□□□□ 0
Clrn1Q8K445 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.06■□□□□ 0
Clrn1Q8K445 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.06■□□□□ 0
Clrn1Q8K445 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Clrn1Q8K445 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Clrn1Q8K445 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clrn1Q8K445 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms