Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfwd3Q8CIK8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfwd3Q8CIK8 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Gm13312-201ENSMUST00000119631 718 ntBASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Ank2-226ENSMUST00000189368 339 ntBASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfwd3Q8CIK8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfwd3Q8CIK8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms