Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Syne4Q8CII8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.02■□□□□ 0.48
Syne4Q8CII8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gm13365-201ENSMUST00000121188 973 ntBASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.02■□□□□ 0.48
Syne4Q8CII8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gm27321-201ENSMUST00000185021 205 ntBASIC18.02■□□□□ 0.48
Syne4Q8CII8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gm45747-201ENSMUST00000212203 999 ntBASIC18.02■□□□□ 0.48
Syne4Q8CII8 Gm5186-201ENSMUST00000218781 920 ntBASIC18.02■□□□□ 0.48
Syne4Q8CII8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Syne4Q8CII8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.02■□□□□ 0.47
Syne4Q8CII8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Syne4Q8CII8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Syne4Q8CII8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Syne4Q8CII8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.02■□□□□ 0.47
Syne4Q8CII8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Syne4Q8CII8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Syne4Q8CII8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.01■□□□□ 0.47
Syne4Q8CII8 Gm44335-201ENSMUST00000196879 141 ntBASIC18.01■□□□□ 0.47
Syne4Q8CII8 Gm44297-201ENSMUST00000198304 141 ntBASIC18.01■□□□□ 0.47
Syne4Q8CII8 Gm44346-201ENSMUST00000198851 141 ntBASIC18.01■□□□□ 0.47
Syne4Q8CII8 Gm5312-201ENSMUST00000203728 547 ntBASIC18.01■□□□□ 0.47
Syne4Q8CII8 Gm19164-201ENSMUST00000210667 640 ntBASIC18.01■□□□□ 0.47
Syne4Q8CII8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syne4Q8CII8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18■□□□□ 0.47
Syne4Q8CII8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Syne4Q8CII8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Syne4Q8CII8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18■□□□□ 0.47
Syne4Q8CII8 Gm15427-201ENSMUST00000117288 531 ntBASIC18■□□□□ 0.47
Syne4Q8CII8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18■□□□□ 0.47
Syne4Q8CII8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18■□□□□ 0.47
Syne4Q8CII8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18■□□□□ 0.47
Syne4Q8CII8 Gm27301-201ENSMUST00000184012 127 ntBASIC18■□□□□ 0.47
Syne4Q8CII8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Gm13127-201ENSMUST00000118978 1389 ntBASIC18■□□□□ 0.47
Syne4Q8CII8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Syne4Q8CII8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Syne4Q8CII8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syne4Q8CII8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syne4Q8CII8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syne4Q8CII8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Syne4Q8CII8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Syne4Q8CII8 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.99■□□□□ 0.47
Syne4Q8CII8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.99■□□□□ 0.47
Syne4Q8CII8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.99■□□□□ 0.47
Syne4Q8CII8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.99■□□□□ 0.47
Syne4Q8CII8 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.99■□□□□ 0.47
Syne4Q8CII8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Syne4Q8CII8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms