Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh1Q8CGV4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Gm7222-201ENSMUST00000117512 906 ntBASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Gm1401-201ENSMUST00000122048 772 ntBASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Gm6257-201ENSMUST00000163864 910 ntBASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 AV026068-213ENSMUST00000223675 1171 ntBASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh1Q8CGV4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.46■□□□□ 0.06
Rdh1Q8CGV4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh1Q8CGV4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Gm27646-201ENSMUST00000183989 110 ntBASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms