Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Calcoco1Q8CGU1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Calcoco1Q8CGU1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Calcoco1Q8CGU1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Calcoco1Q8CGU1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Gm10231-201ENSMUST00000181584 441 ntBASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Gm10175-202ENSMUST00000208752 441 ntBASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Gm7791-201ENSMUST00000219066 539 ntBASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Calcoco1Q8CGU1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Gm37025-201ENSMUST00000195159 829 ntBASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Calcoco1Q8CGU1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms