Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Mir6404-201ENSMUST00000183699 94 ntBASIC19.77■□□□□ 0.76
Smc5Q8CG46 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Smc5Q8CG46 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smc5Q8CG46 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Gm10052-201ENSMUST00000168019 960 ntBASIC19.76■□□□□ 0.75
Smc5Q8CG46 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Gm7729-201ENSMUST00000050143 801 ntBASIC19.76■□□□□ 0.75
Smc5Q8CG46 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.76■□□□□ 0.75
Smc5Q8CG46 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc5Q8CG46 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc5Q8CG46 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.74■□□□□ 0.75
Smc5Q8CG46 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.74■□□□□ 0.75
Smc5Q8CG46 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.73■□□□□ 0.75
Smc5Q8CG46 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.73■□□□□ 0.75
Smc5Q8CG46 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc5Q8CG46 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.73■□□□□ 0.75
Smc5Q8CG46 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc5Q8CG46 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms