Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Gm11779-201ENSMUST00000118541 368 ntBASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Gm8000-201ENSMUST00000188378 592 ntBASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ufl1Q8CCJ3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Gm5682-201ENSMUST00000173402 505 ntBASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ufl1Q8CCJ3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ufl1Q8CCJ3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.08■□□□□ 0.65
Ufl1Q8CCJ3 Gm14140-201ENSMUST00000119999 995 ntBASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Gm11594-201ENSMUST00000122313 162 ntBASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Gm6257-201ENSMUST00000163864 910 ntBASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Gm5867-201ENSMUST00000063197 592 ntBASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ufl1Q8CCJ3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms