Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.62■□□□□ 0.57
Alx1Q8C8B0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.62■□□□□ 0.57
Alx1Q8C8B0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Gm25990-201ENSMUST00000102440 86 ntBASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Gm11452-201ENSMUST00000122376 690 ntBASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx1Q8C8B0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.61■□□□□ 0.57
Alx1Q8C8B0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alx1Q8C8B0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Gm8344-201ENSMUST00000119813 856 ntBASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Gm6089-201ENSMUST00000197666 938 ntBASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx1Q8C8B0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Alx1Q8C8B0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Alx1Q8C8B0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Alx1Q8C8B0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Alx1Q8C8B0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Alx1Q8C8B0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Alx1Q8C8B0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms