Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim9Q8C7M3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim9Q8C7M3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Rprl3-201ENSMUST00000157400 290 ntBASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim9Q8C7M3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim9Q8C7M3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms