Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Gm25745-201ENSMUST00000174945 133 ntBASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Ccdc60Q8C4J0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc60Q8C4J0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Gm12644-201ENSMUST00000119935 606 ntBASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Gm17971-201ENSMUST00000190239 806 ntBASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc60Q8C4J0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Ccdc60Q8C4J0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc60Q8C4J0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc60Q8C4J0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.33■□□□□ 0.84
Ccdc60Q8C4J0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.33■□□□□ 0.84
Ccdc60Q8C4J0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms