Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rft1Q8C3B8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rft1Q8C3B8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rft1Q8C3B8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rft1Q8C3B8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms