Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Gm16061-201ENSMUST00000122167 857 ntBASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps9d1Q8C190 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Gm18115-201ENSMUST00000221209 621 ntBASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps9d1Q8C190 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps9d1Q8C190 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps9d1Q8C190 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms