Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Gm2308-201ENSMUST00000166539 1004 ntBASIC22.48■■□□□ 1.19
Usp47Q8BY87 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 AC158538.2-201ENSMUST00000225455 906 ntBASIC22.48■■□□□ 1.19
Usp47Q8BY87 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp47Q8BY87 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC22.47■■□□□ 1.19
Usp47Q8BY87 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Gm15590-201ENSMUST00000078419 552 ntBASIC22.47■■□□□ 1.19
Usp47Q8BY87 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC22.47■■□□□ 1.19
Usp47Q8BY87 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp47Q8BY87 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp47Q8BY87 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Gm43548-201ENSMUST00000197139 2353 ntBASIC22.46■■□□□ 1.19
Usp47Q8BY87 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp47Q8BY87 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC22.46■■□□□ 1.19
Usp47Q8BY87 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Usp47Q8BY87 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Usp47Q8BY87 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Gm10461-201ENSMUST00000202073 4786 ntBASIC22.45■■□□□ 1.18
Usp47Q8BY87 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Gm15358-201ENSMUST00000119249 520 ntBASIC22.45■■□□□ 1.18
Usp47Q8BY87 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp47Q8BY87 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Gm6184-201ENSMUST00000120403 1261 ntBASIC22.44■■□□□ 1.18
Usp47Q8BY87 Gm1401-201ENSMUST00000122048 772 ntBASIC22.44■■□□□ 1.18
Usp47Q8BY87 Gm27525-201ENSMUST00000184465 107 ntBASIC22.44■■□□□ 1.18
Usp47Q8BY87 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Gm19164-201ENSMUST00000210667 640 ntBASIC22.44■■□□□ 1.18
Usp47Q8BY87 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC22.44■■□□□ 1.18
Usp47Q8BY87 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp47Q8BY87 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Usp47Q8BY87 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Usp47Q8BY87 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Usp47Q8BY87 Gm27628-201ENSMUST00000184911 107 ntBASIC22.43■■□□□ 1.18
Usp47Q8BY87 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC22.43■■□□□ 1.18
Usp47Q8BY87 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp47Q8BY87 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms