Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp43Q8BUM9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.16■□□□□ 0.18
Usp43Q8BUM9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp43Q8BUM9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Gm44454-201ENSMUST00000198541 138 ntBASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp43Q8BUM9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Usp43Q8BUM9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms