Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scfd1Q8BRF7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Gm15467-201ENSMUST00000120582 445 ntBASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Gm5264-201ENSMUST00000190584 848 ntBASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Gm37935-201ENSMUST00000192012 982 ntBASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Gm19164-201ENSMUST00000210667 640 ntBASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scfd1Q8BRF7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Gm5867-201ENSMUST00000063197 592 ntBASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.19■□□□□ 0.5
Scfd1Q8BRF7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Gm12260-201ENSMUST00000122447 411 ntBASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Gm9727-201ENSMUST00000161387 555 ntBASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scfd1Q8BRF7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms