Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Gm6736-201ENSMUST00000166583 948 ntBASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Mir6404-201ENSMUST00000183699 94 ntBASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Gm9727-201ENSMUST00000161387 555 ntBASIC16.91■□□□□ 0.3
Rd3Q8BRE0 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.91■□□□□ 0.3
Rd3Q8BRE0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rd3Q8BRE0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rd3Q8BRE0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rd3Q8BRE0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rd3Q8BRE0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rd3Q8BRE0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Gm43575-201ENSMUST00000196420 516 ntBASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rd3Q8BRE0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.88■□□□□ 0.29
Rd3Q8BRE0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms