Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.44■□□□□ 0.22
Suds3Q8BR65 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Gm18421-201ENSMUST00000204122 625 ntBASIC16.44■□□□□ 0.22
Suds3Q8BR65 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Suds3Q8BR65 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Suds3Q8BR65 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.44■□□□□ 0.22
Suds3Q8BR65 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Suds3Q8BR65 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Suds3Q8BR65 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.42■□□□□ 0.22
Suds3Q8BR65 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.42■□□□□ 0.22
Suds3Q8BR65 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Suds3Q8BR65 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.41■□□□□ 0.22
Suds3Q8BR65 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.41■□□□□ 0.22
Suds3Q8BR65 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Gm27704-201ENSMUST00000185094 107 ntBASIC16.41■□□□□ 0.22
Suds3Q8BR65 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms