Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sfr1Q8BP27 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.23■□□□□ 0.19
Sfr1Q8BP27 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Gm15372-201ENSMUST00000120729 834 ntBASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Gm28033-201ENSMUST00000184224 96 ntBASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Gm44454-201ENSMUST00000198541 138 ntBASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sfr1Q8BP27 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Sfr1Q8BP27 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sfr1Q8BP27 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sfr1Q8BP27 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Sfr1Q8BP27 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Gm12895-201ENSMUST00000122214 226 ntBASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms