Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.98■□□□□ 0.31
Trim6Q8BGE7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Gm8520-201ENSMUST00000186517 868 ntBASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim6Q8BGE7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Trim6Q8BGE7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trim6Q8BGE7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trim6Q8BGE7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim6Q8BGE7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim6Q8BGE7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim6Q8BGE7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Gm11539-201ENSMUST00000119837 557 ntBASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms