Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Usp6nlQ80XC3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp6nlQ80XC3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Chchd1-203ENSMUST00000224633 557 ntBASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp6nlQ80XC3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Gm8344-201ENSMUST00000119813 856 ntBASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Usp6nlQ80XC3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp6nlQ80XC3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Gm15358-201ENSMUST00000119249 520 ntBASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms