Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Prpf40bQ80W14 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf40bQ80W14 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.39■□□□□ 0.54
Prpf40bQ80W14 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 AV026068-213ENSMUST00000223675 1171 ntBASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf40bQ80W14 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf40bQ80W14 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Gm15920-201ENSMUST00000118998 402 ntBASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Gm25911-201ENSMUST00000157621 56 ntBASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Gm7506-201ENSMUST00000207758 815 ntBASIC18.37■□□□□ 0.53
Prpf40bQ80W14 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf40bQ80W14 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Gm8097-201ENSMUST00000117903 829 ntBASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.36■□□□□ 0.53
Prpf40bQ80W14 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Gm27628-201ENSMUST00000184911 107 ntBASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Gm44430-201ENSMUST00000203376 995 ntBASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms