Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Gm18246-201ENSMUST00000221023 728 ntBASIC24.59■■□□□ 1.53
Rpap1Q80TE0 AC131187.1-201ENSMUST00000224567 809 ntBASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Rprl2-201ENSMUST00000157150 290 ntBASIC24.58■■□□□ 1.53
Rpap1Q80TE0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Rpph1-201ENSMUST00000175096 319 ntBASIC24.58■■□□□ 1.53
Rpap1Q80TE0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Rpap1Q80TE0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Rpap1Q80TE0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC24.57■■□□□ 1.52
Rpap1Q80TE0 AC140397.2-201ENSMUST00000224213 834 ntBASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Rpap1Q80TE0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Gm43338-201ENSMUST00000198617 2223 ntBASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpap1Q80TE0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC24.55■■□□□ 1.52
Rpap1Q80TE0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpap1Q80TE0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms