Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ush1gQ80T11 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ush1gQ80T11 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ush1gQ80T11 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ush1gQ80T11 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Gm14140-201ENSMUST00000119999 995 ntBASIC17.44■□□□□ 0.38
Ush1gQ80T11 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Gm6550-201ENSMUST00000187574 993 ntBASIC17.44■□□□□ 0.38
Ush1gQ80T11 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.44■□□□□ 0.38
Ush1gQ80T11 Gm43575-201ENSMUST00000196420 516 ntBASIC17.44■□□□□ 0.38
Ush1gQ80T11 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ush1gQ80T11 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.43■□□□□ 0.38
Ush1gQ80T11 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.43■□□□□ 0.38
Ush1gQ80T11 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ush1gQ80T11 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Gm6089-201ENSMUST00000197666 938 ntBASIC17.42■□□□□ 0.38
Ush1gQ80T11 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.42■□□□□ 0.38
Ush1gQ80T11 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ush1gQ80T11 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ush1gQ80T11 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Gm24513-201ENSMUST00000174964 138 ntBASIC17.41■□□□□ 0.38
Ush1gQ80T11 Gm27397-201ENSMUST00000184997 107 ntBASIC17.41■□□□□ 0.38
Ush1gQ80T11 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.41■□□□□ 0.38
Ush1gQ80T11 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.41■□□□□ 0.38
Ush1gQ80T11 Haglr-201ENSMUST00000100000 2085 ntBASIC17.41■□□□□ 0.38
Ush1gQ80T11 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ush1gQ80T11 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ush1gQ80T11 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms