Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf139Q7TMV1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Gm25745-201ENSMUST00000174945 133 ntBASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf139Q7TMV1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf139Q7TMV1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Gm12644-201ENSMUST00000119935 606 ntBASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.05■□□□□ 0.32
Rnf139Q7TMV1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Gm6257-201ENSMUST00000163864 910 ntBASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf139Q7TMV1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms