Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Gm9682-201ENSMUST00000197505 556 ntBASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snrnp40Q6PE01 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Gm42900-201ENSMUST00000197184 2167 ntBASIC14□□□□□ -0.17
Snrnp40Q6PE01 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 AC151836.1-202ENSMUST00000226259 753 ntBASIC14□□□□□ -0.17
Snrnp40Q6PE01 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snrnp40Q6PE01 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Gm13616-201ENSMUST00000120600 222 ntBASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Gm13597-201ENSMUST00000121239 375 ntBASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Snrnp40Q6PE01 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms