Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smarcc2Q6PDG5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc2Q6PDG5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc2Q6PDG5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc2Q6PDG5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Gm17971-201ENSMUST00000190239 806 ntBASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms