Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herc4Q6PAV2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herc4Q6PAV2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Herc4Q6PAV2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Herc4Q6PAV2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Herc4Q6PAV2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.64■□□□□ 0.42
Herc4Q6PAV2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Herc4Q6PAV2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Mir3081-201ENSMUST00000175305 84 ntBASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc4Q6PAV2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Mir6404-201ENSMUST00000183699 94 ntBASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herc4Q6PAV2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms