Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdhga7Q6DD96 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga7Q6DD96 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga7Q6DD96 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga7Q6DD96 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga7Q6DD96 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhga7Q6DD96 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhga7Q6DD96 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gm37722-201ENSMUST00000193757 208 ntBASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gm21559-201ENSMUST00000220638 855 ntBASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gm8587-201ENSMUST00000076538 843 ntBASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga7Q6DD96 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Gm27389-201ENSMUST00000183622 195 ntBASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga7Q6DD96 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms