Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sdc3Q64519 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sdc3Q64519 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sdc3Q64519 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.33■□□□□ 0.04
Sdc3Q64519 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.33■□□□□ 0.04
Sdc3Q64519 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Gm11452-201ENSMUST00000122376 690 ntBASIC15.33■□□□□ 0.04
Sdc3Q64519 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sdc3Q64519 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sdc3Q64519 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sdc3Q64519 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.32■□□□□ 0.04
Sdc3Q64519 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.32■□□□□ 0.04
Sdc3Q64519 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.32■□□□□ 0.04
Sdc3Q64519 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Gm15165-201ENSMUST00000118140 502 ntBASIC15.32■□□□□ 0.04
Sdc3Q64519 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.32■□□□□ 0.04
Sdc3Q64519 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Sdc3Q64519 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Sdc3Q64519 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sdc3Q64519 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.32■□□□□ 0.04
Sdc3Q64519 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Sdc3Q64519 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.32■□□□□ 0.04
Sdc3Q64519 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.31■□□□□ 0.04
Sdc3Q64519 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Gm44454-201ENSMUST00000198541 138 ntBASIC15.31■□□□□ 0.04
Sdc3Q64519 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sdc3Q64519 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sdc3Q64519 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.3■□□□□ 0.04
Sdc3Q64519 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sdc3Q64519 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.3■□□□□ 0.04
Sdc3Q64519 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sdc3Q64519 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.3■□□□□ 0.04
Sdc3Q64519 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sdc3Q64519 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sdc3Q64519 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sdc3Q64519 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms