Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zfp248Q640N4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zfp248Q640N4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm15565-201ENSMUST00000118890 427 ntBASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm18101-201ENSMUST00000215769 548 ntBASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm21559-201ENSMUST00000220638 855 ntBASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gm8587-201ENSMUST00000076538 843 ntBASIC12.17□□□□□ -0.46
Zfp248Q640N4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zfp248Q640N4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.17□□□□□ -0.46
Zfp248Q640N4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gm22697-201ENSMUST00000175194 63 ntBASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gm37722-201ENSMUST00000193757 208 ntBASIC12.16□□□□□ -0.46
Zfp248Q640N4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zfp248Q640N4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Gm6433-201ENSMUST00000118634 875 ntBASIC12.15□□□□□ -0.46
Zfp248Q640N4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms