Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Sox16Q62247 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.03□□□□□ -0.96
Sox16Q62247 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Sox16Q62247 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.03□□□□□ -0.96
Sox16Q62247 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC9.03□□□□□ -0.96
Sox16Q62247 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Sox16Q62247 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sox16Q62247 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sox16Q62247 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC9.02□□□□□ -0.96
Sox16Q62247 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Sox16Q62247 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Sox16Q62247 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sox16Q62247 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sox16Q62247 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Sox16Q62247 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sox16Q62247 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC9.02□□□□□ -0.96
Sox16Q62247 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Sox16Q62247 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Sox16Q62247 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC9.02□□□□□ -0.97
Sox16Q62247 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Sox16Q62247 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Sox16Q62247 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.02□□□□□ -0.97
Sox16Q62247 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Sox16Q62247 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sox16Q62247 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Sox16Q62247 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.01□□□□□ -0.97
Sox16Q62247 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sox16Q62247 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sox16Q62247 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9□□□□□ -0.97
Sox16Q62247 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms